Insertion junction: CLIP2.012224_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.012224
Chromosome:chromosome 17
Location:3036398
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g720000 CCT9 (1 of 1) IPR002423//IPR027409 - Chaperonin Cpn60/TCP-1 family // GroEL-like apical domain; T-complex protein 1, eta subunit intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCAAACAATAACATGGTTGCTGCCACGCCGCTTCACCTGCTGAGCTGC
Internal bar code:GATATCCCCATGGCGGGTAAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:3137
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:49
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:49

Suggested primers for confirmation by PCR

Suggested primer 1:TACTCCTCCTGTCCCAGTCG
Suggested primer 2:GAGGAGGAGCAGGAGACAGA