Insertion junction: CLIP2.012226_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.012226
Chromosome:chromosome 10
Location:5217885
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g456000 FAP191 (1 of 4) K03809 - NAD(P)H dehydrogenase (quinone) (wrbA); Flagellar Associated Protein191 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCCCACCCACCCTGAACAGGTGCGCCTCCACGTCCCCAGTGCTCTCCAG
Internal bar code:GTTTTTTGATAGCTCCGTCATT

Confirmation - LEAP-Seq

LEAP-Seq distance:2620
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:AATCCGGTGGTCTCGGTCTA
Suggested primer 2:CCTGCATGCATTCCCGATTG