Insertion junction: CLIP2.012226_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.012226
Chromosome:chromosome 10
Location:5217885
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g456000 FAP191 (1 of 4) K03809 - NAD(P)H dehydrogenase (quinone) (wrbA); Flagellar Associated Protein191 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGCAAGCTAGGTGGATGCCGTGTTGAGCGGCGCCTGTCCTGTTTGACTC
Internal bar code:GTTTTTTGATAGCTCCGTCATT

Confirmation - LEAP-Seq

LEAP-Seq distance:1727
LEAP-Seq percent confirming:94.1176
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:CCTGCATGCATTCCCGATTG
Suggested primer 2:AATCCGGTGGTCTCGGTCTA