Insertion junction: CLIP2.012231_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.012231
Chromosome:chromosome 9
Location:836493
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g403700 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGGCTTGGTCTGCCGTCGCGTGGCACCCTCACACAGACCCGCAGGTCG
Internal bar code:CGCCTTCCTAGAGGATATTAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:3477
LEAP-Seq percent confirming:90.3226
LEAP-Seq n confirming:84
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:93

Suggested primers for confirmation by PCR

Suggested primer 1:TTCCCCGAGATTGAGGTTGC
Suggested primer 2:AGGTATCGGGGCACACAAAG