Insertion junction: CLIP2.012233_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.012233
Chromosome:chromosome 1
Location:2504228
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g014700 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCAAGGCGAAATCATCTCCAAGCTTGCTTCAGGGTGACCTGGCTCAAG
Internal bar code:TACTTAAGGCTTAGTCGTGAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:812
LEAP-Seq percent confirming:40.0
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:CAAGCAGTTGTTTCCGTGGG
Suggested primer 2:AGAAGTGCACTCCCTTGACG