Insertion junction: CLIP2.012238_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.012238
Chromosome:chromosome 16
Location:977416
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g648750 (1 of 1) PF10373 - Est1 DNA/RNA binding domain (EST1_DNA_bind) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAACAATTGATCTGTTACCACCGCTAATGCCACCTGTACGGCGCACAGG
Internal bar code:ACCAAAGTTGGTTAGGACACTG

Confirmation - LEAP-Seq

LEAP-Seq distance:508
LEAP-Seq percent confirming:9.09091
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:20
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:TGAAGCGGTCCGTATCCATG
Suggested primer 2:GCCACACCTGCTTTTGTACG