Insertion junction: CLIP2.012241_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.012241
Chromosome:chromosome 3
Location:5615182
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g185900 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTAAATGGCTGTCGGCCCCGCCGGGCAAGCGCCAGCGCCCGCGACTGGC
Internal bar code:GCATTCCGCGCGTTGGTGAACC

Confirmation - LEAP-Seq

LEAP-Seq distance:1346
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:GAGGTCCCAGTGTGTTGGAG
Suggested primer 2:CTGGGGATGGAGGTTGGAAC