Insertion junction: CLIP2.012250_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.012250
Chromosome:chromosome 2
Location:680502
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g077925 (1 of 1) PTHR15628//PTHR15628:SF1 - FAMILY NOT NAMED // RWD DOMAIN-CONTAINING PROTEIN 3 intron
Cre02.g077951 (1 of 14) 3.6.3.25 - Sulfate-transporting ATPase; putative ABC family transporter 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTTCCTCGACAGCCTTTACCTGTAGTCAGTGAAGGCCCGCTGTCCACAG
Internal bar code:ATTAGATGATATCTAACACCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2448
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:ATATGCATACCTGGCTGGGC
Suggested primer 2:CCAGCCCTGATCCCAACAAT