Insertion junction: CLIP2.012257_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.012257
Chromosome:chromosome 3
Location:1178568
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g149350 RWP4 (1 of 16) PF02042 - RWP-RK domain (RWP-RK); RWP-RK transcription factor CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCCGGCGGCGGCAGCGGTGTCGTCCCAGCGCCGTTGCCGACTATGCCG
Internal bar code:AGAGAGTGTCGTTCGGGTTGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:4560
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:ACTGCCATCCATTGCATCCA
Suggested primer 2:CAGCCGATAGTGCCCACTAG