Insertion junction: CLIP2.012257_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.012257
Chromosome:chromosome 3
Location:1178576
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g149350 RWP4 (1 of 16) PF02042 - RWP-RK domain (RWP-RK); RWP-RK transcription factor CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGATGGCGGCAGTCGTAGGGGCGGAGAGCGGTCGAACGGCGGGCAAAAT
Internal bar code:AGAGAGTGTCGTTCGGGTTGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1572
LEAP-Seq percent confirming:94.1176
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:CAGCCGATAGTGCCCACTAG
Suggested primer 2:ACTGCCATCCATTGCATCCA