Insertion junction: CLIP2.012265_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.012265
Chromosome:chromosome 3
Location:809232
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g146267 (1 of 2) IPR000571//IPR002110//IPR020683 - Zinc finger, CCCH-type // Ankyrin repeat // Ankyrin repeat-containing domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGTTTGCGACCTAGCTCCGGAGCCCCAGCTGCTCCTAACACGCCCTAGC
Internal bar code:AGAGAGCCACGGGATTAATACC

Confirmation - LEAP-Seq

LEAP-Seq distance:2975
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:77
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:77

Suggested primers for confirmation by PCR

Suggested primer 1:CAGGTCAGCTCCTCAATGCA
Suggested primer 2:TAAGTCACGTGTCCACAGGC