Insertion junction: CLIP2.012266_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.012266
Chromosome:chromosome 11
Location:3819558
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g479383 (1 of 1) IPR000104//IPR013122 - Antifreeze protein, type I // Polycystin cation channel, PKD1/PKD2 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCTGCGCTATGGTGGGGTAGCGTAGCAGCAGCAGCAGCAGCAGCAGCAG
Internal bar code:TTATTCTGCCTTGGGTCTCGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:7055
LEAP-Seq percent confirming:4.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:72
LEAP-Seq n unique pos:75

Suggested primers for confirmation by PCR

Suggested primer 1:TGAGTTCTGCAAAAGCGTGC
Suggested primer 2:ACTAACCACTTTCGCGCTCA