Insertion junction: CLIP2.012268_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.012268
Chromosome:chromosome 14
Location:2025857
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g621100 (1 of 1) IPR000104//IPR001810//IPR025886 - Antifreeze protein, type I // F-box domain // Phloem protein 2-like intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTAGCTGACGTGACACGGCCTGGCCCAGCACCTCAGCAGGGCCCCTCAG
Internal bar code:AGTATTACGGAGTGGCTGGGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1852
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:CGCGTGTCATTTGTGTGTGT
Suggested primer 2:CAGTGTATGCGATGCAGTGC