Insertion junction: CLIP2.012268_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.012268
Chromosome:chromosome 14
Location:2025859
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g621100 (1 of 1) IPR000104//IPR001810//IPR025886 - Antifreeze protein, type I // F-box domain // Phloem protein 2-like intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTTTTTGGCAACAAGGGAAGACGAACCCCTTGGATGAGCTACCTAACCC
Internal bar code:AGTATTACGGAGTGGCTGGGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:165
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:CAGTGTATGCGATGCAGTGC
Suggested primer 2:CGCGTGTCATTTGTGTGTGT