Insertion junction: CLIP2.012270_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.012270
Chromosome:chromosome 7
Location:1532485
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g324500 MMP22 Matrix metalloproteinase; (1 of 40) 3.4.24.38 - Gametolysin / Lysin CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCGGCGAGGACATCACCACCCCCACGGAGCCCAAGTTTCTGGTTTACCT
Internal bar code:AATCTGTGCCGCTTGATGGACA

Confirmation - LEAP-Seq

LEAP-Seq distance:1914
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:ATAGTAGCCGGAAAGCGACG
Suggested primer 2:ATCGTAGTCGCATCTGCCTG