Insertion junction: CLIP2.012271_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.012271
Chromosome:chromosome 5
Location:2173614
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g237250 (1 of 752) IPR027417 - P-loop containing nucleoside triphosphate hydrolase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCTTCGTGGTTGCGAGATCAGTCACGCCTTGCTTTGCCCTTTTCAGTGT
Internal bar code:TAATGAATGGAATCTCGCCGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2510
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:CGCCAGTCCTCGTCTTTTCT
Suggested primer 2:CAAAGCTCATCGATGCCGTG