Insertion junction: CLIP2.012272_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.012272
Chromosome:chromosome 16
Location:4717741
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g677702 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCTCGCTGCCAACTCACTCAGTGGTGGGCTGTCACCCATGCCCGGTGGC
Internal bar code:TATTATCATCTTTATTTGTTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2075
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:AACGCCAATACCCGATACCC
Suggested primer 2:GTTCACCCGGACATGACAGT