Insertion junction: CLIP2.012274_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.012274
Chromosome:chromosome 3
Location:4304185
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g174150 (1 of 9) IPR000210//IPR011042//IPR011333 - BTB/POZ domain // Six-bladed beta-propeller, TolB-like // POZ domain CDS
Cre03.g174200 (1 of 9) IPR000210//IPR011042//IPR011333 - BTB/POZ domain // Six-bladed beta-propeller, TolB-like // POZ domain outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGCGGTCCGTGCAGCGTACGTCAGCAATTTAGCATGTGTAACAGAGGGC
Internal bar code:AAAAAACTAATTTTTATTGCCC

Confirmation - LEAP-Seq

LEAP-Seq distance:2053
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:TTGAGTCGCATCAGGGTCAC
Suggested primer 2:CGGAGGTCTGATCGGTCATG