Insertion junction: CLIP2.012282_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.012282
Chromosome:chromosome 7
Location:2346275
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g328226 (1 of 6) IPR000817 - Prion protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAAGAGAGAACTCATGCATGTTGATGTCGCGTGGTGCGCGCACAGGTGG
Internal bar code:AAAAGAATTCCGCCAACATGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2534
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:44
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:44

Suggested primers for confirmation by PCR

Suggested primer 1:AACAACCCTCAACCGAAGCA
Suggested primer 2:CATGGGCGTAACGAAACAGC