Insertion junction: CLIP2.012285_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.012285
Chromosome:chromosome 2
Location:2813094
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g094450 PHC38,PHC21 Pherophorin-chlamydomonas homolog 38; (1 of 24) IPR003882//IPR024616 - Pistil-specific extensin-like protein // Pherophorin CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATGGCAAGCCCATCTCATCGTCGCTGTACATCGATGAGATCCCCAACGT
Internal bar code:TTACTAAGGGGGCGACTACGT

Confirmation - LEAP-Seq

LEAP-Seq distance:258
LEAP-Seq percent confirming:78.5714
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:GCGTCCTCCTTTGAGAACCA
Suggested primer 2:GGGATGTTGGGAGTTGCAGA