Insertion junction: CLIP2.012309_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.012309
Chromosome:chromosome 3
Location:8158243
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g200651 (1 of 5) IPR001841//IPR013083 - Zinc finger, RING-type // Zinc finger, RING/FYVE/PHD-type CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGGCGGCGTTCGGTTCTGGCGCCATCCGCCGAGGCGCGGATGACCCCGA
Internal bar code:GTGATTTTCAGCGTCACACTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2199
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:CATCCAAACCAGCATACGCG
Suggested primer 2:GGAATGGAGCGTCAGTGGAA