Insertion junction: CLIP2.012312_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.012312
Chromosome:chromosome 16
Location:7542539
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g683147 (1 of 44) IPR000048 - IQ motif, EF-hand binding site intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGAACCCAAGGGCCGCAGGCTTCTGGCGCCCTCTCAGCCCGCTATTGC
Internal bar code:CAGCTCGAGCGGCCGTCTATGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1730
LEAP-Seq percent confirming:95.0
LEAP-Seq n confirming:38
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:TCTCGTGACATCCCCAAAGC
Suggested primer 2:AATGGCTTGCTCCACATCCA