Insertion junction: CLIP2.012313_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.012313
Chromosome:chromosome 12
Location:3317400
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g498800 (1 of 1) PTHR23176:SF0 - RHO GTPASE-ACTIVATING PROTEIN 68F CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGGTTCCACCGGGGCCGCGCGGCATGGGGCCGCCGGGCGGGACCAGGCC
Internal bar code:ATTTTACGAGTAGTAGCCTCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1269
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:44
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:48

Suggested primers for confirmation by PCR

Suggested primer 1:ATCAAGAAGGTGAGAGGCGC
Suggested primer 2:CGCAGTCCTGATACTCGTCC