Insertion junction: CLIP2.012316_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.012316
Chromosome:chromosome 7
Location:4420897
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g343200 (1 of 12) IPR000595//IPR018490 - Cyclic nucleotide-binding domain // Cyclic nucleotide-binding-like intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAAACCCAGCTAAACCGAGACCCAACGTGGGCGGAACGGGTGGCGCCTGG
Internal bar code:CGTTGGTGAAAATATGACCAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1375
LEAP-Seq percent confirming:70.5882
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:CACGCCATCTATCGTCACGA
Suggested primer 2:GGGGAGTTTCAGGACACTGG