Insertion junction: CLIP2.012344_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.012344
Chromosome:chromosome 12
Location:4096760
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g516800 (1 of 8) IPR000719//IPR001245//IPR011009 - Protein kinase domain // Serine-threonine/tyrosine-protein kinase catalytic domain // Protein kinase-like domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTAGAAAGTCGGCCGGCATTGGGTGCGAGCGGACCGCAGCGCGCCCCTGC
Internal bar code:TCACTATGTACTGCACTTTCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:5656
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:AGTTCTCCAGCCGTGTCTTG
Suggested primer 2:TTGTTACGTTGTTGCCGCTG