Insertion junction: CLIP2.012356_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.012356
Chromosome:chromosome 7
Location:4033079
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g340300 Protein tyrosine kinase; (1 of 41) IPR000719//IPR011009 - Protein kinase domain // Protein kinase-like domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCATGACAAAACGAAGGACCTGGCCCGTTGTGCCTGGTTACCACAGCGG
Internal bar code:TTCAAATAATATCCTAGGGTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:2499
LEAP-Seq percent confirming:89.4737
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:CTCATCCGGCATCGTGTACA
Suggested primer 2:ACCTTGACCCCGTATCCAGA