Insertion junction: CLIP2.012365_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.012365
Chromosome:chromosome 13
Location:5176219
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g607350 CAH7 (1 of 2) PTHR11002:SF13 - BETA CARBONIC ANHYDRASE 1; Carbonic anhydrase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGTCTGGCCCCCGGCGAGGTGTTTGTGCAGCGCAATGTGGGCAACCAG
Internal bar code:TCCATTGTTGATCTTGGACGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:817
LEAP-Seq percent confirming:46.1538
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:CCCTCCGCTGTTCTCAAGTT
Suggested primer 2:TAGCCCCAGGGAAAATGCTG