Insertion junction: CLIP2.012371_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.012371
Chromosome:chromosome 15
Location:5577906
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre46.g760947 (1 of 7) IPR022772 - von Hippel-Lindau disease tumour suppressor, beta/alpha domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACACGCGCCCACACACGCCCACACGCCCACGTGCCCGCAGGTGTCCGCCT
Internal bar code:TCTTCGAGCAGCCCAAAATGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:126
LEAP-Seq percent confirming:1.63934
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:60
LEAP-Seq n unique pos:61

Suggested primers for confirmation by PCR

Suggested primer 1:TGGGCAAGGTTTGGGAGTTT
Suggested primer 2:GCGGCGGTTATAACGGTTTC