Insertion junction: CLIP2.012372_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.012372
Chromosome:chromosome 16
Location:1157849
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g650300 HTR39,HTR25 Histone H3; (1 of 35) K11253 - histone H3 (H3) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTCCTGAGCAATCTCGCGGACCAGGCGCTGGAACGGCAGCTTGCGGATG
Internal bar code:CTTCTACGGTATTTCAGACCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2188
LEAP-Seq percent confirming:93.1034
LEAP-Seq n confirming:81
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:87

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGTAAGTGACCGAGTCGC
Suggested primer 2:GCAATACGCCATGTCAGCTG