Insertion junction: CLIP2.012379_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.012379
Chromosome:chromosome 6
Location:6273977
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g292500 CYN23b,CYN23 Cyclophilin 23; (1 of 1) PTHR11071//PTHR11071:SF17 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE // CYCLOPHILIN-LIKE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FAMILY PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGGGCGTGAAGCCACACGGTTGCCTCGAGACAAGACCCGAAAGCCCCTC
Internal bar code:GCCTATTTTTATCTGAGGATGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1717
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:TCGACACTCCAGACGGTACT
Suggested primer 2:GCCTATCTCACACCTGCTCC