Insertion junction: CLIP2.012387_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.012387
Chromosome:chromosome 16
Location:6759845
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g672602 (1 of 30) PTHR24349:SF79 - NITROGEN NETWORK KINASE 1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGTGGTAGGCTCCCCGCCGCCTGTCCTGCGCGATGGTGCGCGGTTTGAG
Internal bar code:TGCGACCTGGTTGAATGGGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1737
LEAP-Seq percent confirming:48.2759
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:GACCAAAGGACCTCCACCTG
Suggested primer 2:CTCCATATCGTCGTGTGCGA