Insertion junction: CLIP2.012395_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.012395
Chromosome:chromosome 12
Location:4018099
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g516050 (1 of 1) PF00498//PF13920 - FHA domain (FHA) // Zinc finger, C3HC4 type (RING finger) (zf-C3HC4_3) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTACTCTGCGCAGCAGGCAGACCAGCGACACACGTGTGAGCCGACTGCAG
Internal bar code:ATTATACGTGGCCTATTCGGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:1802
LEAP-Seq percent confirming:91.5493
LEAP-Seq n confirming:65
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:71

Suggested primers for confirmation by PCR

Suggested primer 1:GCTGGACGACGATGCAGATA
Suggested primer 2:GCTGGTTGTGCAGTTGACTG