Insertion junction: CLIP2.012398_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.012398
Chromosome:chromosome 16
Location:4567151
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g671250 (1 of 3) K12041 - solute carrier family 9 (sodium/hydrogen exchanger), member 6/7 (SLC9A6_7, NHE6_7) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGGAGTGACCCATGCATACTTGAAGGGGGAGGGCTCGAGTTCAGCGTCA
Internal bar code:GCAAGCTGAGTTTGTGATCTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:1075
LEAP-Seq percent confirming:96.5517
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:CGCGGTGTTTGCAAAGTACA
Suggested primer 2:GGACTTGACACGAACGGACT