Insertion junction: CLIP2.012405_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.012405
Chromosome:chromosome 13
Location:5026512
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g606300 (1 of 6) 2.7.7.84 - 2'-5' oligoadenylate synthase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCACCGGCTGGCCAGCAAGGCGCGGGCCCTGCGTCGGGTGGTGCTGCA
Internal bar code:GGGTCAATACTGCGGGGGGCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1950
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:56
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:56

Suggested primers for confirmation by PCR

Suggested primer 1:CCCAAATGCGCAGTCACAAA
Suggested primer 2:GGAGTTGACACTGAGCGGAA