Insertion junction: CLIP2.012407_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.012407
Chromosome:chromosome 12
Location:2513002
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00076030

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATATCACGACAACGCACGGTCACACGCCAGGTCATGCTGGCACACGCTT
Internal bar code:GTTATTGATATCGATCGCATAC

Confirmation - LEAP-Seq

LEAP-Seq distance:2659
LEAP-Seq percent confirming:56.7568
LEAP-Seq n confirming:63
LEAP-Seq n nonconfirming:48
LEAP-Seq n unique pos:111

Suggested primers for confirmation by PCR

Suggested primer 1:CGGTCGCATTTTCTTTGGCA
Suggested primer 2:CCGGGTCGTTCTTGTAACCA