Insertion junction: CLIP2.012415_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.012415
Chromosome:chromosome 17
Location:1567534
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g707200 LIC2 (1 of 5) PF02931 - Neurotransmitter-gated ion-channel ligand binding domain (Neur_chan_LBD); Ligand-gated ion channel intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCAAACACTTTGCATCCCAGCATCTAACCTTTTTGTGTTTATCTTGTTT
Internal bar code:ATGGGTAGAACAGATCTGTGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:678
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:TAGTCCACAGCGTGACCAAC
Suggested primer 2:TTCAGCACCTCGGAGAACAC