Insertion junction: CLIP2.012416_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.012416
Chromosome:chromosome 3
Location:2095593
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g156400 SMM8 S-adenosyl-L-methionine-dependent methyltransferase; (1 of 1) 2.1.1.145 - Trans-aconitate 3-methyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCACTTGTCGTGGCTGCCACTGCGCCACGGTGGGGCCAACATGGCGCCG
Internal bar code:TCTTATCTGACTGACTCGTATG

Confirmation - LEAP-Seq

LEAP-Seq distance:1214
LEAP-Seq percent confirming:94.9153
LEAP-Seq n confirming:56
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:59

Suggested primers for confirmation by PCR

Suggested primer 1:TGCTCTGTTCCGCACTGAAT
Suggested primer 2:AGGGCGGTCTGTAGTTTGTG