Insertion junction: CLIP2.012425_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.012425
Chromosome:chromosome 14
Location:3112349
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g628400 TSA3 (1 of 3) 6.1.1.7 - Alanine--tRNA ligase / Alanyl-tRNA synthetase; Alanyl-tRNA-synthetase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACTTCTAATTGCGTCAGGGACCGGCGAGACGGCGCGAAGGCTCGGAAGC
Internal bar code:AACTGCTGGAGGTTCGTCGCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:5127
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:CCAGGAACGTCAACTCGACA
Suggested primer 2:TGCGTGTTTGGAAGCACATG