Insertion junction: CLIP2.012430_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.012430
Chromosome:chromosome 6
Location:8379284
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g307800 CYN49 (1 of 1) IPR003609//IPR029000 - PAN/Apple domain // Cyclophilin-like domain; Cyclophilin 49 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCACCCCAGCCCGCCACGGGCAGCCGCGCCTGGCCGTGGCCACAAACGC
Internal bar code:CACCCCTAGGCCGCTCTGCTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1909
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:CAGCTCGTTGGTCGACTTCT
Suggested primer 2:AGGACTTTGGCATACAGGGC