Insertion junction: CLIP2.012433_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.012433
Chromosome:chromosome 7
Location:5241190
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00101007

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCAAGCCTACTCAAAGCTCCTGCATTCGCCCTGCAGCCCGGTCCAGAT
Internal bar code:TAGGTGGCGAATTCCGGGGGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:4389
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:131
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:131

Suggested primers for confirmation by PCR

Suggested primer 1:CTCCCTGCCGTTTGTTACCT
Suggested primer 2:ACCTCGTTAAAAGGGAGCGG