Insertion junction: CLIP2.012438_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.012438
Chromosome:chromosome 3
Location:7392709
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g206200 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCTGTTGTGTCCTCAATCGCACTTAAATATGTGGGAGCATTGCAGTTC
Internal bar code:GAATGCGAGCAGCCGTGAGAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1751
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:CGTCATCCTCGCTCTTACCC
Suggested primer 2:ATTGCCAGCCCCTTTACCTC