Insertion junction: CLIP2.012442_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.012442
Chromosome:chromosome 6
Location:3152474
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g275900 HON2,HON3 Histone H1; (1 of 3) K11275 - histone H1/5 (H1_5) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTTGTCAAGAGCGGCAAGCTCATCAAGGTCAAGAACAGCTTCAAGCTGT
Internal bar code:CGAAACCAGAAAGACGGGGAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:5241
LEAP-Seq percent confirming:99.115
LEAP-Seq n confirming:112
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:113

Suggested primers for confirmation by PCR

Suggested primer 1:CTCGACGATCCACCCTGATG
Suggested primer 2:GGTGCCAAAACGTTAACGCT