Insertion junction: CLIP2.012444_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.012444
Chromosome:chromosome 16
Location:2346553
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g659100 (1 of 752) IPR027417 - P-loop containing nucleoside triphosphate hydrolase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCAGTCACCCAGACATTGCCTCCGTTGTGCCCTTGAGGGGCCGATGAGC
Internal bar code:GTATATGAAAAACCATCTGGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2020
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:TTCCTCACACCACGTTCTCG
Suggested primer 2:AGTCCTTGCTGTGGCTGTAC