Insertion junction: CLIP2.012451_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.012451
Chromosome:chromosome 12
Location:4858787
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g523650 HLM19 (1 of 68) 2.1.1.43 - Histone-lysine N-methyltransferase / Protein-lysine N-methyltransferase; Histone-lysine N-methyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTTGAGACAAGGGAGCCCAGCCGTCCCTTTTACACAGGCACGCACTGGT
Internal bar code:GTCGCGGTATCGTTCTTTTGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:253
LEAP-Seq percent confirming:81.8182
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:TTCCAGCTACCAACACCGAC
Suggested primer 2:GGATCCAGTTTCACTCGGCA