Insertion junction: CLIP2.012458_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.012458
Chromosome:chromosome 2
Location:3203809
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g096850 (1 of 1) PF05620 - Protein of unknown function (DUF788) (DUF788) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACCCCGCACAAACACCCGGCCCATTCGCGGAGTTGCCCAGGGGCAAGGG
Internal bar code:GGACTTTTGATCAGACTTATAC

Confirmation - LEAP-Seq

LEAP-Seq distance:235
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:CAAAAGCCAGCTTGAGCCAG
Suggested primer 2:ACTTACGAACAGCGGCAAGA