Insertion junction: CLIP2.012466_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.012466
Chromosome:chromosome 7
Location:2050282
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g325812 MAW1,ZYS2 Membrane-associated hydroxyproline-rich glycoprotein 1; (1 of 80) IPR003882 - Pistil-specific extensin-like protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTAGTTCCATCCATCTCTATGGCCATGCGCAACGCCGTGGCCCTGGCCGT
Internal bar code:GCGACATGGTTTCCTTCCCGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:495
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GGCTAGGTGGAGATGGGGAT
Suggested primer 2:GAGGCACGTAGACGATGAGG