Insertion junction: CLIP2.012483_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.012483
Chromosome:chromosome 3
Location:5950510
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g189050 EMAN,EAM1 (1 of 1) 3.2.1.130 - Glycoprotein endo-alpha-1,2-mannosidase; Endomannosidase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGTGGGGGGTGTCAGACAGCGGGAAGCCCACGTCTGCCTAAGAGCCTG
Internal bar code:ATATCGGTCGTCGAATGTTGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:442
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:CATCTGCGTACTCGTCCTCC
Suggested primer 2:AAGCGGTGGTTCTACAGCAA