Insertion junction: CLIP2.012485_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.012485
Chromosome:chromosome 6
Location:5397169
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g285500 (1 of 2) K13173 - arginine and glutamate-rich protein 1 (ARGLU1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGGCCTGGACCGGGTTTGGGTTGTCTGGGCTCAGGCCCACTGACACGCA
Internal bar code:GTTATCGTGGAGTTGAGAGATG

Confirmation - LEAP-Seq

LEAP-Seq distance:3408
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:GCAGTCACGACACAACACAC
Suggested primer 2:AATCAGCTCCGGCACAATGA