Insertion junction: CLIP2.012485_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.012485
Chromosome:chromosome 6
Location:5397169
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g285500 (1 of 2) K13173 - arginine and glutamate-rich protein 1 (ARGLU1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGCATATACCGTAACCGCAAGTTTCACATGCCTCCACCACACCGCCGCA
Internal bar code:CGCGACAGGGGGATCCAACCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2235
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:AATCAGCTCCGGCACAATGA
Suggested primer 2:GCAGTCACGACACAACACAC