Insertion junction: CLIP2.012493_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.012493
Chromosome:chromosome 1
Location:89558
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g000600 (1 of 1) PTHR19848//PTHR19848:SF0 - WD40 REPEAT PROTEIN // NOTCHLESS PROTEIN HOMOLOG 1; Predicted WD-4 repeat family protein / notchless protein, putative intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCATCATCCGTGGGCAGCTAGTGGCCGTGCGCACTGGGGCCACACGTGAC
Internal bar code:CTTTTTCTTAGTGAGTATACCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1470
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:CTGGTAGTGTGGGGCGTAAG
Suggested primer 2:GAGGTGGGGTTGCGAAGTTA